Difference between revisions of "NAMD"

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[http://www.ks.uiuc.edu/Research/namd/ NAMD] is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. Based on Charm++ parallel objects, NAMD scales to hundreds of processors on high-end parallel platforms and tens of processors on commodity clusters using gigabit ethernet. NAMD uses the popular molecular graphics program [http://www.ks.uiuc.edu/Research/vmd/ VMD] for simulation setup and trajectory analysis, but is also file-compatible with [http://amber.scripps.edu/ AMBER], [http://www.charmm.org/ CHARMM], and [http://atb.csb.yale.edu/xplor/ X-PLOR]. NAMD is distributed free of charge with source code. You can build NAMD yourself or download binaries for a wide variety of platforms. Our tutorials show you how to use NAMD and VMD for biomolecular modeling.
 
[http://www.ks.uiuc.edu/Research/namd/ NAMD] is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. Based on Charm++ parallel objects, NAMD scales to hundreds of processors on high-end parallel platforms and tens of processors on commodity clusters using gigabit ethernet. NAMD uses the popular molecular graphics program [http://www.ks.uiuc.edu/Research/vmd/ VMD] for simulation setup and trajectory analysis, but is also file-compatible with [http://amber.scripps.edu/ AMBER], [http://www.charmm.org/ CHARMM], and [http://atb.csb.yale.edu/xplor/ X-PLOR]. NAMD is distributed free of charge with source code. You can build NAMD yourself or download binaries for a wide variety of platforms. Our tutorials show you how to use NAMD and VMD for biomolecular modeling.
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[[Category: Materials modeling and Computer simulation codes]]

Revision as of 16:56, 26 February 2007

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. Based on Charm++ parallel objects, NAMD scales to hundreds of processors on high-end parallel platforms and tens of processors on commodity clusters using gigabit ethernet. NAMD uses the popular molecular graphics program VMD for simulation setup and trajectory analysis, but is also file-compatible with AMBER, CHARMM, and X-PLOR. NAMD is distributed free of charge with source code. You can build NAMD yourself or download binaries for a wide variety of platforms. Our tutorials show you how to use NAMD and VMD for biomolecular modeling.