Reverse Monte Carlo: Difference between revisions

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== References ==
== References ==
#R.L.McGreevy and L. Pusztai, ''Mol. Simulation,'' '''1''' 359-367 (1988)
#[http://dx.doi.org/10.1080/08927028808080958 R.L.McGreevy and L. Pusztai, "Reverse Monte Carlo Simulation: A New Technique for the Determination of Disordered Structures", Molecular  Simulation, '''1''' pp. 359-367 (1988)]

Revision as of 19:52, 19 February 2007

Reverse Monte Carlo (RMC) [1] is a variation of the standard Metropolis Monte Carlo (MMC) method. It is used to produce a 3 dimensional atomic model that fits a set of measurements (Neutron-, X-ray-diffraction, EXAFS etc.). In addition to measured data a number of constraints based on prior knowledge of the system (like chemocal bonds etc.) can be applied. Some examples are:

  1. Closest approach between atoms (hard sphere potential)
  2. Coordination numbers.
  3. Angels in triplets of atoms.

The algorithm for RMC can be written:

1. Start with a configuration of atoms with periodic boundary conditions. This can be a random or a crystalline configuration from a different simulation or model. 2. Calculate the total radial distribution function goC(r) for this old configuration. 3. Transform to the total structure factor: So2(Q)−1=4πρQ∫0infr(goC(r)−1)sin(Qr)dr

where Q is the momentum transfer ρ and the number density. 4. Calculate the difference between the measured structure factor SE(Q) and the one calculated from the configuration SoC(Q): χo2=∑i(SoC(Qi)−SE(Qi))2/σ(Qi)2

this sum is taken over all experimental points σ is the experimental error. 5. Select and move one atom at random and calculate the new distribution function, structure factor and: χn2=∑i(SnC(Qi)−SE(Qi))2/σ(Qi)2 6. If χn2<χo2 accept the move and let the new configuration become the old. If χn2>χo2 then the move is accepted with probability exp(−(χn2−χ02)/2) otherwiase rejected. 7. repeat from step 5. When χ2 have reached an equilibrium the configuration is saved and can be analysed.


References

  1. R.L.McGreevy and L. Pusztai, "Reverse Monte Carlo Simulation: A New Technique for the Determination of Disordered Structures", Molecular Simulation, 1 pp. 359-367 (1988)