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The [http://dasher.wustl.edu/tinker/ TINKER] molecular modeling software is a complete and general package for molecular mechanics and dynamics, with some special features for biopolymers. TINKER has the ability to use any of several common parameter sets, such as the [[AMBER forcefield]] ([[AMBER forcefield#ff94 | ff94]], [[AMBER forcefield#ff96 | ff96]], [[AMBER forcefield#ff98 | ff98]] and [[AMBER forcefield#ff99 | ff99]]), [[CHARMM]] (19 and 27), Allinger MM ([[MM2]]-1991 and [[MM3]]-2000), [[OPLS]] (OPLS-UA, OPLS-AA and OPLS-AA/L), Liam Dang's polarizable potentials, and our own [[AMOEBA]] polarizable atomic multipole force field. Parameter sets for other standard force fields such as [[GROMOS]], [[UFF]], [[ENCAD]] and [[MM4]] are under consideration for future releases. | The [http://dasher.wustl.edu/tinker/ TINKER] molecular modeling software is a complete and general package for molecular mechanics and dynamics, with some special features for biopolymers. TINKER has the ability to use any of several common parameter sets, such as the [[AMBER forcefield]] ([[AMBER forcefield#ff94 | ff94]], [[AMBER forcefield#ff96 | ff96]], [[AMBER forcefield#ff98 | ff98]] and [[AMBER forcefield#ff99 | ff99]]), [[CHARMM]] (19 and 27), Allinger MM ([[MM2]]-1991 and [[MM3]]-2000), [[OPLS]] (OPLS-UA, OPLS-AA and OPLS-AA/L), Liam Dang's polarizable potentials, and our own [[AMOEBA]] polarizable atomic multipole force field. Parameter sets for other standard force fields such as [[GROMOS]], [[UFF]], [[ENCAD]] and [[MM4]] are under consideration for future releases. | ||
==References== | ==References== | ||
#J. W. Ponder and F. M. Richards "", Journal of Computational Chemistry '''8''' pp. 1016-1024 (1987) | #J. W. Ponder and F. M. Richards "", Journal of Computational Chemistry '''8''' pp. 1016-1024 (1987) |