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| '''Proteins''' are a particular group of [[Linear polymers |linear chain]] [[polymers]], built up from a collection of 20 different monomers known as '''amino acids'''. Proteins, unlike many synthetic polymers, have a very specific sequence (and hence length), which results in a specific three-dimensional structure. Presently much computational effort is dedicated to the prediction of such structure from a given sequence.
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| ==Potentials and models== | | ==Potentials and models== |
| *[[CABS model]]
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| *[[Chen and Imamura model]]
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| *[[DFIRE model]]
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| *[[Go potential]] | | *[[Go potential]] |
| | ===Hydrogen bond models=== |
| *[[Irbäck hydrogen bond model]] | | *[[Irbäck hydrogen bond model]] |
| *[[Nanias model]]
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| *[[Patchy particles]]
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| *[[TE-13 model]]
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| ==Systems== | | ==Systems== |
| *[[Amelogenin]]
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| *[[Chymotrypsin Inhibitor 2 (CI2)]]
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| *[[Ubiquitin]] | | *[[Ubiquitin]] |
| *[[Villin headpiece]] | | *[[Villin headpiece]] |
| *[[Bovine pancreatic trypsin inhibitor (BPTI)]]
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| ==Other== | | ==Other== |
| *[[Folding@Home]] | | *[[Folding@Home]] |
| *[[I-TASSER]]
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| ==General Reading== | | ==General Reading== |
| *[http://dx.doi.org/10.1126/science.181.4096.223 Christian B. Anfinsen "Principles that Govern the Folding of Protein Chains", Science '''181''' pp. 223-230 (1973)]
| | #[http://dx.doi.org/10.1126/science.181.4096.223 Christian B. Anfinsen "Principles that Govern the Folding of Protein Chains", Science '''181''' pp. 223-230 (1973)] |
| * Thomas E. Creighton "Proteins: Structures and Molecular Properties", W. H. Freeman, Second Edition edition (1993) ISBN 071677030X
| | #[http://dx.doi.org/10.1140/epjd/e2006-00241-9 A.V. Yakubovich, I.A. Solov'yov, A.V. Solov'yov and W. Greiner "Phase transition in polypeptides: a step towards the understanding of protein folding", The European Physical Journal D '''40''' pp. 363-367 (2006)] |
| *[http://dx.doi.org/10.1140/epjd/e2006-00241-9 A.V. Yakubovich, I.A. Solov'yov, A.V. Solov'yov and W. Greiner "Phase transition in polypeptides: a step towards the understanding of protein folding", The European Physical Journal D '''40''' pp. 363-367 (2006)]
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| *[http://dx.doi.org/10.1063/1.3626859 Arieh Ben-Naim "Some aspects of the protein folding problem examined in one-dimensional systems", Journal of Chemical Physics '''135''' 085104 (2011)]
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| * Arieh Ben-Naim "The Protein Folding Problem and Its Solutions", World Scientific Publishing (2013) ISBN 978-981-4436-35-9
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| * Arieh Ben-Naim "Myths and Verities in Protein Folding Theories", World Scientific Publishing (2016) ISBN 978-981-4725-98-9
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| [[category: proteins]]
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