Difference between revisions of "AMBER -- Assisted Model Building with Energy Refinement"

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m (This page is now mainly for the AMBER package (not forcefield))
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[http://amber.scripps.edu/ AMBER] refers to two things: a set of molecular mechanical force fields for the simulation of biomolecules (which are in the public domain, and are used in a variety of simulation programs); and a package of molecular simulation programs which includes source code and demos.
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AMBER is a package of molecular simulation programs which includes source code and demos. The same name (see [[AMBER]] entry) is given to a set of molecular mechanical force fields for the simulation of biomolecules (which are in the public domain, and are used in a variety of simulation programs).
 
==References==
 
==References==
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#[http://amber.scripps.edu/ AMBER homepage]
 
#[http://dx.doi.org/10.1002/jcc.20290 David A. Case, Thomas E. Cheatham III, Tom Darden, Holger Gohlke, Ray Luo, Kenneth M. Merz Jr., Alexey Onufriev, Carlos Simmerling, Bing Wang, Robert J. Woods "The Amber biomolecular simulation programs", Journal of Computational Chemistry '''26''' pp. 1668-1688 (2005)]
 
#[http://dx.doi.org/10.1002/jcc.20290 David A. Case, Thomas E. Cheatham III, Tom Darden, Holger Gohlke, Ray Luo, Kenneth M. Merz Jr., Alexey Onufriev, Carlos Simmerling, Bing Wang, Robert J. Woods "The Amber biomolecular simulation programs", Journal of Computational Chemistry '''26''' pp. 1668-1688 (2005)]
 
[[Category: Materials modelling and computer simulation codes]]
 
[[Category: Materials modelling and computer simulation codes]]
 
[[Category: Force fields]]
 
[[Category: Force fields]]

Revision as of 16:40, 4 February 2008

AMBER is a package of molecular simulation programs which includes source code and demos. The same name (see AMBER entry) is given to a set of molecular mechanical force fields for the simulation of biomolecules (which are in the public domain, and are used in a variety of simulation programs).

References

  1. AMBER homepage
  2. David A. Case, Thomas E. Cheatham III, Tom Darden, Holger Gohlke, Ray Luo, Kenneth M. Merz Jr., Alexey Onufriev, Carlos Simmerling, Bing Wang, Robert J. Woods "The Amber biomolecular simulation programs", Journal of Computational Chemistry 26 pp. 1668-1688 (2005)